PPDB

The Plant Proteome Database

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AT2G03680.1   spiral1

Lab Annot. spiral1
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: spindle microtubule & cortical microtubule (sensu Viridiplantae) & preprophase band & phragmoplast15155883
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G03680.3 11Arabidopsis thaliana2E-811191001000 (0)_
AT2G03680.2 11Arabidopsis thaliana2E-8111910010023 (21)_
AT1G69230.1 11Arabidopsis thaliana3E-3512060679 (6)M
Os12g31780.1 7Oryza sativa3E-2610854610 (0)M
Os12g31780.2 7Oryza sativa3E-2610854610 (0)M
Os03g30430.2 7Oryza sativa4E-215676820 (0)M
Zm00001eb166450_P002 agpv5Zea mays2E-2212048530 (0)M
v1_GRMZM2G165461_P01 4a53Zea mays2E-2212048531 (1)M
GRMZM2G165461_P01 3.21Zea mays2E-2212048535 (5)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DEC-1_N(1)
TargetP: Cytoplasm (Class 5 C0.367; M0.175; S0.015; _0.470)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 119 aa (-cTP 72)
Molecular Weight 11.92 kDA(-cTP )
PI 7.88(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1398Detail       leaf [A. thaliana] total leaf tissue 1.14 Prep1_Prep2
1420Detail        [A. thaliana]  
1427Detail        [A. thaliana] total leaf tissue 1.11 wild-type
1428Detail        [A. thaliana] total leaf tissue 1.11 Prep1_Prep2_t1_t2
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2021Detail       leaf [A. thaliana] total leaf tissue  
2192Detail        [A. thaliana] total soluble P3-trap-strepII 16
2245Detail       seedlings [A. thaliana] total tissue wild-type
2246Detail       seedlings [A. thaliana] total tissue gfs9
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2251Detail       seedlings [A. thaliana] total tissue wild-type
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

19200160(flower-stage 12)
19816138(rosette leaves)
21173025(root proteome)

Comparative Proteomics Data


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