PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G03670.1   cell division cycle 48B

Lab Annot.
Mapman: 29.5.9 protein.degradation.AAA type
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G03670.2 11Arabidopsis thaliana04251001000 (0)_
AT3G53230.1 11Arabidopsis thaliana1E-141507426493 (70)_
AT5G03340.1 11Arabidopsis thaliana1E-1395074263213 (161)_
Os04g42110.1 7Oryza sativa053864780 (0)_
Os05g31220.1 7Oryza sativa2E-16138764770 (0)_
Os10g30580.1 7Oryza sativa9E-142507426379 (79)_
v1_GRMZM2G149994_P05 4a53Zea mays042367800 (0)_
Zm00001eb425850_P002 agpv5Zea mays042366790 (0)M
GRMZM2G149994_P04 3.21Zea mays053867810 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AAA(2) AAA_11(2) AAA_14(2) AAA_16(3) AAA_17(2) AAA_18(2) AAA_19(2) AAA_2(2) AAA_
TargetP: Cytoplasm (Class 2 C0.218; M0.046; S0.018; _0.951)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 1 TMs
TAT position:
Length 603 aa (-cTP 590)
Molecular Weight 65.91 kDA(-cTP )
PI 6.64(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1018Detail        [aphid]  
1639Detail       leaf [A. thaliana] total leaf tissue stromaclpt2-1

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help