PPDB

The Plant Proteome Database

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AT2G03510.1   SPFH/Band 7/PHB domain-containing membrane-associated protein family

Lab Annot. band 7 protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g30790.1 7Oryza sativa032472880 (0)C
Zm00001eb393170_P002 agpv5Zea mays033474870 (0)C
GRMZM2G054020_P01 3.21Zea mays033474874 (4)C
v1_GRMZM2G054020_P01 4a53Zea mays033474874 (3)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Band_7(1)
TargetP: Cytoplasm (Class 3 C0.037; M0.472; S0.032; _0.882)
Predotar:
Subcel. Location:
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position:
Length 356 aa (-cTP 305)
Molecular Weight 40.60 kDA(-cTP )
PI 5.65(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1615Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1744Detail        [A. thaliana] Mep-6
2249Detail       seedlings [A. thaliana] total tissue gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2272Detail       seedlings [A. thaliana] total tissue wild-type
2273Detail       seedlings [A. thaliana] total tissue wild-type
2274Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

15496452(nucleolus)
16618929(ER-LOPIT-callus)
17151019(vacuole - suspension cell)
19200160(flower-stage 12)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
21533090(plasmodesmata-crude)
21693672(wound-regulated leaf proteome (AOS mutant))
21173025(root proteome)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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