PPDB

The Plant Proteome Database

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AT2G03420.1   hypothetical protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g11230.1 7Oryza sativa2E-54120698216 (16)M
Zm00001eb400470_P001 agpv5Zea mays9E-5113958720 (0)C
GRMZM2G113205_P01 3.21Zea mays9E-5113958728 (8)C
v1_GRMZM2G113205_P01 4a53Zea mays9E-5113958726 (6)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Lyase_aromatic(1)
TargetP: Chloroplast (Class 3 C0.650; M0.156; S0.017; _0.039)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 170 aa (-cTP 110) (-lTP 105)
Molecular Weight 19.03 kDA(-cTP 12.39)(-lTP 11.91)
PI 8.63(-cTP 5.68)(-lTP 6.615)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1875Detail       Total leaf [A. thaliana] total soluble wild-type
1876Detail       Total leaf [A. thaliana] total soluble wild-type
2039Detail       Total leaf [A. thaliana] chloroplast stromawt and icp55c-3
2054Detail       Total leaf [A. thaliana] total soluble wt and prep1-1xprep2-1xoop
2075Detail       Total leaf [A. thaliana] total soluble wt & clpt1xclpt2

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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