PPDB

 The Plant Proteome Database

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AT2G03270.1   DNA-binding protein
Lab Annot. DNA-binding protein
Mapman: 28.99 DNA.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G35970.1 11Arabidopsis thaliana1E-1096923554300 (227)C
AT5G47010.1 11Arabidopsis thaliana2E-57447335140 (34)_
AT4G15570.2 11Arabidopsis thaliana2E-4652030450 (0)_
Os03g38990.1 7Oryza sativa063576882 (2)C
Os09g04440.1 7Oryza sativa3E-11768835540 (0)M
Os09g04440.2 7Oryza sativa4E-9364233520 (0)M
Zm00001eb049300_P002 agpv5Zea mays063376870 (0)M
v1_GRMZM2G146486_P03 4a53Zea mays063376871 (1)M
GRMZM2G146486_P03 3.21Zea mays063376872 (2)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA(1) AAA_11(2) AAA_12(1) AAA_16(1) AAA_19(1) AAA_22(1) AAA_25(2) AAA_30(1) AAA
TargetP: Cytoplasm (Class 5 C0.116; M0.044; S0.534; _0.543)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 639 aa (-cTP 600)
Molecular Weight 70.85 kDA(-cTP )
PI 8.20(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1

* For details about the exprimental sources click here.

Published Proteomics Data

 21166475(cytosolic-fractions-crude)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help