PPDB

 The Plant Proteome Database

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AT2G03140.1   alpha/beta-Hydrolases superfamily protein
Lab Annot. alpha/beta-Hydrolases
Mapman: 26.57* misc.alpha/beta-Hydrolase family
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G03140.8 11Arabidopsis thaliana017971001000 (0)C
AT2G03140.9 11Arabidopsis thaliana017971001000 (0)C
AT2G03140.7 11Arabidopsis thaliana017971001000 (0)C
Os09g26570.1 7Oryza sativa4E-8729248690 (0)M
Os02g43340.1 7Oryza sativa2E-3531432510 (0)C
Os02g43340.2 7Oryza sativa2E-3531432510 (0)C
v1_GRMZM2G446625_P02 4a53Zea mays5E-17467946630 (0)C
v1_GRMZM2G446625_P01 4a53Zea mays5E-17467946630 (0)C
GRMZM2G446625_P01 3.21Zea mays5E-17467946630 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Abhydrolase_1(1) CPBP(1)
TargetP: Chloroplast (Class 1 C0.955; M0.090; S0.004; _0.028)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 7 TMs
Aramemnon: 10 TMs
TAT position:
Length 1797 aa (-cTP 1728)
Molecular Weight 196.05 kDA(-cTP 188.45)
PI 4.99(-cTP 4.89)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1933Detail       leaf [A. thaliana] chloroplast wild-type
1936Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1938Detail       leaf [A. thaliana] chloroplast Prep1_Prep2
1983Detail       leaf [A. thaliana] plastid wild-type
1986Detail       leaf [A. thaliana] plastid Prep1_Prep2
1987Detail       leaf [A. thaliana] plastid Prep1_Prep2
1988Detail       leaf [A. thaliana] plastid Prep1_Prep2
2311Detail       leaf [A. thaliana] PG plastoglobule 
2318Detail       leaf [A. thaliana] PG plastoglobule 
2321Detail       leaf [A. thaliana]  
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 19995728(proplastid (Brassica napus))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help