PPDB

PPDB	The Plant Proteome Database

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AT2G02990.1 ribonuclease 1

Lab Annot.

ribonuclease T2 (AtRNS1)
Mapman: 27.1.19 RNA.processing.ribonucleases

Curated Location

TAIR curated location: extracellular region9880376

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G14220.1 11 Arabidopsis thaliana 3E-104 230 60 73 0 (0) S
AT1G26820.1 11 Arabidopsis thaliana 7E-102 230 56 71 0 (0) S
AT1G14210.1 11 Arabidopsis thaliana 1E-78 229 47 64 0 (0) S
Os08g33710.1 7 Oryza sativa 1E-92 222 55 70 2 (2) S
Os07g43670.1 7 Oryza sativa 2E-68 238 44 58 0 (0) S
Os09g36680.1 7 Oryza sativa 7E-44 204 35 55 35 (35) S
v1_GRMZM2G161274_P01 4a53 Zea mays 1E-98 207 59 75 7 (7) S
GRMZM2G161274_P02 3.21 Zea mays 1E-98 207 59 75 3 (3) S
Zm00001eb041390_P001 agpv5 Zea mays 1E-98 207 59 75 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ribonuclease_T2(1)
TargetP:	Secreted (Class 1 C0.011; M0.013; S0.995; _0.031)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	230 aa (-cTP 208)
Molecular Weight	25.40 kDA(-cTP )
PI	5.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

14595688(Cell Wall proteome)
17317660(Plasma Membrane proteome)
19200160(flower-stage 12)
18716313(secreted proteins (cell culture))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data