PPDB

PPDB	The Plant Proteome Database

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AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

OTP85 - PPR protein - editing ndhD
Mapman: 27.1.5* RNA.processing.editing

Curated Location

plastid (Pubmed: 23198870 19934379 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G66520.1 11 Arabidopsis thaliana 7E-162 600 39 58 4 (4) _
AT4G21065.1 11 Arabidopsis thaliana 2E-160 569 40 64 0 (0) S
AT1G11290.1 11 Arabidopsis thaliana 8E-159 558 42 63 1 (1) C
Os03g58100.1 7 Oryza sativa 0 578 55 73 0 (0) C
Os07g02280.1 7 Oryza sativa 5E-155 603 39 58 0 (0) C
Os06g02200.1 7 Oryza sativa 3E-152 559 41 62 0 (0) C
v1_GRMZM2G099604_P01 4a53 Zea mays 0 591 53 71 2 (2) C
GRMZM2G099604_P01 3.21 Zea mays 0 591 53 71 4 (4) C
Zm00001eb213020_P001 agpv5 Zea mays 0 591 53 71 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DYW_deaminase(2) PPR(10) PPR_1(8) PPR_2(7) PPR_3(7) PPR_long(6) RPN7(3) TPR_14(5
TargetP:	Chloroplast (Class 2 C0.843; M0.021; S0.097; _0.220)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	603 aa (-cTP 565)
Molecular Weight	68.17 kDA(-cTP 64.07)
PI	7.24(-cTP 7.03)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data