PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT2G02930.1 glutathione S-transferase F3

Lab Annot.

ATGSTF3, glutathione transferase 16, GST16
Mapman: 26.9 misc.glutathione S transferases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G02520.1 11 Arabidopsis thaliana 2E-145 211 92 96 874 (554) _
AT1G02920.1 11 Arabidopsis thaliana 8E-113 212 74 83 206 (81) _
AT1G02930.2 11 Arabidopsis thaliana 6E-112 212 73 85 227 (76) _
Os01g27340.1 7 Oryza sativa 6E-58 212 45 61 0 (0) S
Os01g27390.1 7 Oryza sativa 4E-54 212 41 63 0 (0) _
Os01g70770.1 7 Oryza sativa 1E-53 214 43 61 31 (31) M
Zm00001eb142220_P001 agpv5 Zea mays 9E-58 212 47 61 0 (0) _
v1_GRMZM2G146246_P01 4a53 Zea mays 9E-58 212 47 61 112 (112) _
GRMZM2G146246_P02 3.21 Zea mays 9E-58 212 47 61 168 (123) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GST_C(1) GST_C_2(1) GST_C_3(1) GST_N(1) GST_N_2(1) GST_N_3(1) GST_N_5(1)
TargetP:	Cytoplasm (Class 4 C0.041; M0.329; S0.109; _0.642)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	212 aa (-cTP 200)
Molecular Weight	24.12 kDA(-cTP )
PI	6.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
135	Detail								leaf [A. thaliana]	plastid thylakoid membrane	wild-type
310	Detail								leaf [A. thaliana]	total leaf tissue	clpr2-1:R2-TAPlong
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1526	Detail								leaf [A. thaliana]	co-IP GST-ClpS 100ug bait stroma	clpc1 x clps (rep. 2)
1527	Detail								leaf [A. thaliana]	co-IP GST-ClpS 10ug bait stroma	clpc1 x clps (rep. 2)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1942	Detail								leaf [A. thaliana]	stroma WT stroma	wild-type
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2180	Detail								leaf [A. thaliana]	stroma Clp	ClpF
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2249	Detail								seedlings [A. thaliana]	total tissue	gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17828791(total leaf)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19888209(80S polysomal fraction)
20516081(tagged-26S proteasome-affinity)

Comparative Proteomics Data