PPDB

PPDB	The Plant Proteome Database

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AT2G02720.1 Pectate lyase family protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G14420.1 11 Arabidopsis thaliana 0 455 73 85 1 (1) S
AT3G01270.1 11 Arabidopsis thaliana 7E-173 474 51 67 0 (0) S
AT5G15110.1 11 Arabidopsis thaliana 1E-172 479 50 66 0 (0) S
Os02g12300.1 7 Oryza sativa 3E-158 456 51 66 0 (0) S
Os06g05209.1 7 Oryza sativa 1E-156 432 54 68 0 (0) S
Os06g05272.1 7 Oryza sativa 4E-153 357 60 75 0 (0) _
v1_GRMZM2G323418_P01 4a53 Zea mays 4E-158 425 53 68 0 (0) S
Zm00001eb377200_P001 agpv5 Zea mays 4E-158 425 53 68 0 (0) S
GRMZM2G323418_P01 3.21 Zea mays 4E-158 425 53 68 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Pec_lyase_N(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 1 C0.003; M0.043; S0.990; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	455 aa (-cTP 432)
Molecular Weight	51.26 kDA(-cTP )
PI	9.56(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)

Comparative Proteomics Data