PPDB

The Plant Proteome Database

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AT2G02590.1   small multi-drug export protein

Lab Annot. membrane transporter
Mapman: 34 transport
Curated Location envelope (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os03g58620.1 7Oryza sativa1E-102204718612 (12)C
Zm00001eb212770_P001 agpv5Zea mays1E-10019672870 (0)C
GRMZM2G009928_P01 3.21Zea mays1E-100196728710 (10)C
v1_GRMZM2G009928_P01 4a53Zea mays1E-10019672879 (9)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sm_multidrug_ex(2)
TargetP: Chloroplast (Class 1 C0.989; M0.011; S0.025; _0.077)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 6 TMs
Aramemnon: 6 TMs
TAT position:
Length 324 aa (-cTP 246) (-lTP 202)
Molecular Weight 35.52 kDA(-cTP 26.68)(-lTP 21.89)
PI 10.04(-cTP 9.58)(-lTP 10.123)

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
342Detail       leaf [A. thaliana] chloroplast low density membranewild-type
877Detail       leaf [A. thaliana] chloroplast stromawild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help