PPDB

PPDB	The Plant Proteome Database

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AT2G02100.1 low-molecular-weight cysteine-rich 69

Lab Annot.

plant defensin-fusion protein, putative (PDF2.2)
Mapman: 20.1 stress.biotic

Curated Location

not plastid (supported by in-house exprements)

TAIR curated location: cell wall (sensu Magnoliophyta)16287169

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G02130.1 11 Arabidopsis thaliana 5E-43 77 81 90 4 (4) S
AT2G02120.1 11 Arabidopsis thaliana 7E-42 77 83 88 0 (0) S
AT1G61070.1 11 Arabidopsis thaliana 4E-32 77 70 83 0 (0) S
Os02g41904.1 7 Oryza sativa 6E-21 80 51 65 1 (1) S
Os03g03810.1 7 Oryza sativa 1E-19 80 57 71 0 (0) S
Os04g11195.1 7 Oryza sativa 3E-16 78 39 56 0 (0) S
GRMZM2G046532_P01 3.21 Zea mays 2E-19 61 63 68 0 (0) S
Zm00001eb304240_P001 agpv5 Zea mays 2E-19 61 63 68 0 (0) S
v1_GRMZM2G046532_P01 4a53 Zea mays 2E-19 61 63 68 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Gamma-thionin(1)
TargetP:	Secreted (Class 1 C0.027; M0.013; S0.985; _0.010)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:
TAT position:
Length	77 aa (-cTP 31)
Molecular Weight	8.52 kDA(-cTP )
PI	9.37(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1412	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.2	clpr2-1
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
2218	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2219	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2222	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2224	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 strep
2225	Detail								leaf [A. thaliana]	total leaf tissue	Clp P3 trap
2226	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2260	Detail								leaf [A. thaliana]	stroma Clp	wild-type
2261	Detail								leaf [A. thaliana]	stroma Clp	clp trap
2262	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2263	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 trap
2266	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 wild-type
2267	Detail								leaf [A. thaliana]	stroma Clp	Clp C1 TRAP
2285	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
WallDB-E.Jamet(cell wall reference proteome)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data