PPDB

 The Plant Proteome Database

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AT2G01900.1   DNAse I-like superfamily protein
Lab Annot. endonuclease/exonuclease/phosphatase protein, similar to inositol polyphosphate 5-phosphatase I
Mapman: 28.1 DNA.synthesis/chromatin structure
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01900.3 11Arabidopsis thaliana04171001000 (0)M
AT2G01900.2 11Arabidopsis thaliana041797970 (0)M
AT2G37440.3 11Arabidopsis thaliana3E-10942345590 (0)M
Os03g13520.1 7Oryza sativa1E-15646052640 (0)M
Os09g23140.1 7Oryza sativa3E-14138854690 (0)M
Os09g23140.2 7Oryza sativa2E-12129359730 (0)C
v1_GRMZM2G178279_P01 4a53Zea mays1E-15745850620 (0)M
Zm00001eb399140_P001 agpv5Zea mays1E-15745850620 (0)M
GRMZM2G178279_P01 3.21Zea mays1E-15745850621 (1)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Exo_endo_phos(1)
TargetP: Mitochondria (Class 5 C0.057; M0.407; S0.062; _0.343)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 417 aa (-cTP 405)
Molecular Weight 47.92 kDA(-cTP )
PI 9.04(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1113Detail        [A. thaliana] control for RARE-1 co-IP wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help