PPDB

The Plant Proteome Database

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AT2G01730.1   cleavage and polyadenylation specificity factor 73 kDa subunit-II

Lab Annot. ATCPSF73-II (CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 73 KDA SUBUNIT-II)
Mapman: 27.1 RNA.processing
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01730.2 11Arabidopsis thaliana05441001000 (0)_
AT1G61010.1 11Arabidopsis thaliana1E-9444338553 (0)_
AT1G61010.2 11Arabidopsis thaliana1E-9444338553 (0)_
Os09g23380.1 7Oryza sativa054665780 (0)_
Os03g63590.1 7Oryza sativa2E-9344337550 (0)C
Os09g39590.1 7Oryza sativa4E-31366274513 (13)_
GRMZM2G160151_P01 3.21Zea mays038772850 (0)_
Zm00001eb159740_P005 agpv5Zea mays038672850 (0)_
v1_GRMZM2G403801_P01 4a53Zea mays044263780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Beta-Casp(1) Lactamase_B(1) Lactamase_B_2(1) Lactamase_B_3(1) Lactamase_B_6(1) R
TargetP: Cytoplasm (Class 3 C0.056; M0.105; S0.210; _0.774)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 613 aa (-cTP 606)
Molecular Weight 68.04 kDA(-cTP )
PI 7.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help