PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT2G01680.1   Ankyrin repeat family protein
Lab Annot. Ankyrin repeat protein
Mapman: 31.1 cell.organisation
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G31820.1 11Arabidopsis thaliana6E-12650743630 (0)_
AT1G07710.2 11Arabidopsis thaliana7E-12652043630 (0)_
AT1G07710.1 11Arabidopsis thaliana7E-12652043630 (0)_
Os02g50270.1 7Oryza sativa052661760 (0)S
Os03g17250.1 7Oryza sativa2E-12749243610 (0)_
Os03g17240.1 7Oryza sativa2E-12452043611 (1)_
Zm00001eb190350_P001 agpv5Zea mays052659750 (0)S
GRMZM2G136996_P02 3.21Zea mays052659750 (0)S
v1_GRMZM2G181522_P01 4a53Zea mays052660750 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ank(5) Ank_2(6) Ank_3(6) Ank_4(6) Ank_5(5) DUF2207(1) PGG(1) PIN_8(1)
TargetP: Secreted (Class 3 C0.008; M0.118; S0.704; _0.262)
Predotar:
Subcel. Location:
TM-HMM prediction: 4 TMs
Aramemnon: 4 TMs
TAT position:
Length 532 aa (-cTP 513)
Molecular Weight 58.83 kDA(-cTP )
PI 8.86(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1393Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)

* For details about the exprimental sources click here.

Published Proteomics Data

 17317660(Plasma Membrane proteome)
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help