PPDB

The Plant Proteome Database

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AT2G01630.1   O-Glycosyl hydrolases family 17 protein

Lab Annot. glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putative
Mapman: 26.4 misc.beta 1,3 glucan hydrolases
Curated Location plasma membrane

TAIR curated location: anchored to membrane12068095,12805588
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01630.3 11Arabidopsis thaliana04381001000 (0)S
AT2G01630.2 11Arabidopsis thaliana038899995 (4)S
AT1G66250.1 11Arabidopsis thaliana047466826 (3)S
Os03g12140.1 7Oryza sativa046171840 (0)S
Os03g12140.3 7Oryza sativa043972850 (0)_
Os03g12140.2 7Oryza sativa043972850 (0)_
Zm00001eb008930_P003 agpv5Zea mays046867820 (0)_
Zm00001eb008930_P004 agpv5Zea mays046867820 (0)_
v1_GRMZM2G111324_P02 4a53Zea mays046867822 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Glyco_hydro_17(1) X8(1)
TargetP: Secreted (Class 2 C0.038; M0.012; S0.773; _0.091)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 501 aa (-cTP 460)
Molecular Weight 53.99 kDA(-cTP )
PI 5.78(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
451Detail       leaf [A. thaliana] total leaf tissue clpr4-1
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1

* For details about the exprimental sources click here.

Published Proteomics Data

12805588(GBI-anchored-callus)
14517339(GPI anchored suspension cells)
16602701(GPI-anchored Plasma membrane suspension cells)
16618929(PlasmaMembrane-LOPIT-callus)
17317660(Plasma Membrane proteome)
WallDB-E.Jamet(cell wall reference proteome)
21173025(root proteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help