PPDB

The Plant Proteome Database

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AT2G01540.1   Calcium-dependent lipid-binding (CaLB domain) family protein

Lab Annot. C2 domain-containing protein
Mapman: 35.1.19 not assigned.no ontology.C2 domain-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G70790.2 11Arabidopsis thaliana2E-8516866851 (0)_
AT1G70790.1 11Arabidopsis thaliana2E-8516866851 (0)_
AT1G70790.3 11Arabidopsis thaliana2E-8516866850 (0)_
Os02g22130.1 7Oryza sativa5E-5716349740 (0)M
Os07g01780.1 7Oryza sativa1E-5215349720 (0)_
Os07g01770.1 7Oryza sativa5E-4915349720 (0)_
v1_GRMZM2G180699_P01 4a53Zea mays3E-5716350740 (0)M
Zm00001eb159470_P001 agpv5Zea mays3E-5716350740 (0)M
GRMZM2G180699_P01 3.21Zea mays3E-5716350740 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: C2(1)
TargetP: Cytoplasm (Class 5 C0.094; M0.335; S0.058; _0.458)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 180 aa (-cTP 132)
Molecular Weight 20.08 kDA(-cTP )
PI 6.42(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1411Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help