PPDB

The Plant Proteome Database

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AT2G01490.1   phytanoyl-CoA dioxygenase (PhyH) family protein

Lab Annot. phytanoyl-CoA dioxygenase (PhyH) protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01490.2 11Arabidopsis thaliana02831001000 (0)_
Os03g50040.1 7Oryza sativa6E-13828065804 (4)M
Os05g39650.1 7Oryza sativa3E-13627764808 (8)_
Os03g50040.2 7Oryza sativa1E-5314260774 (4)M
Zm00001eb054520_P004 agpv5Zea mays1E-15028167850 (0)_
GRMZM2G086003_P01 3.21Zea mays1E-15028167855 (5)_
v1_GRMZM2G086003_P01 4a53Zea mays1E-15028167855 (5)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PhyH(1)
TargetP: Cytoplasm (Class 2 C0.127; M0.108; S0.106; _0.834)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 283 aa (-cTP 255)
Molecular Weight 32.03 kDA(-cTP )
PI 5.93(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
351Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
18463617(suspension cells-phosphorylated proteins)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21173025(root proteome)

Comparative Proteomics Data


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