PPDB

PPDB	The Plant Proteome Database

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AT2G01470.1 SEC12P-like 2 protein

Lab Annot.

STL2P (SEC12P-LIKE PROTEIN); nucleotide binding
Mapman: 29.3.4 protein.targeting.secretory pathway

Curated Location

ER (Pubmed: 9159953 )

TAIR curated location: integral to endoplasmic reticulum membrane9159953

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G50550.1 11 Arabidopsis thaliana 1E-177 361 75 87 0 (0) _
AT5G50650.1 11 Arabidopsis thaliana 1E-177 361 75 87 0 (0) _
AT3G52190.1 11 Arabidopsis thaliana 4E-30 317 29 47 0 (0) C
Os11g39650.1 7 Oryza sativa 1E-90 397 43 60 4 (4) M
Os07g09000.1 7 Oryza sativa 4E-44 327 32 48 0 (0) _
Os03g58570.1 7 Oryza sativa 2E-29 233 32 51 0 (0) M
Zm00001eb166990_P002 agpv5 Zea mays 2E-88 389 43 59 0 (0) M
GRMZM2G011364_P01 3.21 Zea mays 2E-88 389 43 59 0 (0) M
v1_GRMZM2G011364_P01 4a53 Zea mays 2E-88 389 43 59 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC4_WD40(4) FixQ(1) WD40(4)
TargetP:	Cytoplasm (Class 2 C0.037; M0.203; S0.020; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	393 aa (-cTP 332)
Molecular Weight	42.79 kDA(-cTP )
PI	5.47(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1494	Detail								leaf [A. thaliana]
1555	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	k1k3
1576	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	K2K3
1577	Detail								leaf [A. thaliana]	TiO2 thylakoid membrane	WT
1612	Detail								Natural Senescence leaf [A. thaliana]	chloroplast fractionation thylakoid membrane
1613	Detail								Natural Senescence leaf [A. thaliana]
1614	Detail								Natural Senescence leaf [A. thaliana]
1615	Detail								Natural Senescence leaf [A. thaliana]
1616	Detail								Natural Senescence leaf [A. thaliana]
1618	Detail								[A. thaliana]		m48
1744	Detail								[A. thaliana]		Mep-6
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2247	Detail								seedlings [A. thaliana]	total tissue	atg5
2250	Detail								seedlings [A. thaliana]	total tissue	atg5
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2268	Detail								seedlings [A. thaliana]	total tissue	wild-type
2270	Detail								seedlings [A. thaliana]	total tissue	wild-type
2271	Detail								seedlings [A. thaliana]	total tissue	wild-type
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

14506206(Plasma Membrane proteome)
14506206(plasma membrane (phosphorylated))
15308754(plasma membrane (phosphorylated))
16618929(ER-LOPIT-callus)
17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
18686298(tonoplast - phosphoproteome (leaves))
19114538(guard cells Arabidopsis leaf)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data