PPDB

PPDB	The Plant Proteome Database

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AT2G01410.1 NHL domain-containing protein

Lab Annot.

unknown protein
Mapman: 35.2 not assigned.unknown

Curated Location

plasma membrane

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G16760.1 11 Arabidopsis thaliana 1E-25 285 33 50 0 (0) S
AT2G47370.1 11 Arabidopsis thaliana 9E-21 295 31 47 0 (0) S
AT2G47370.2 11 Arabidopsis thaliana 3E-20 247 34 51 0 (0) S
Os01g42140.1 7 Oryza sativa 4E-28 353 32 46 0 (0) S
Os03g19452.2 7 Oryza sativa 2E-23 193 38 54 0 (0) _
Os03g19452.1 7 Oryza sativa 2E-23 256 33 48 0 (0) _
GRMZM2G005187_P01 3.21 Zea mays 8E-33 362 33 46 0 (0) S
Zm00001eb357840_P001 agpv5 Zea mays 8E-33 362 33 46 0 (0) S
v1_GRMZM2G005187_P01 4a53 Zea mays 8E-33 362 33 46 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ABC2_membrane_3(1) SBBP(1) SGL(2)
TargetP:	Secreted (Class 5 C0.019; M0.316; S0.463; _0.024)
Predotar:
Subcel. Location:
TM-HMM prediction:	2 TMs
Aramemnon:	1 TMs
TAT position:
Length	387 aa (-cTP 354)
Molecular Weight	43.02 kDA(-cTP )
PI	5.43(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17151019(vacuole - suspension cell)
17644812(plasma membrane - suspension cells)
19546170(mature pollen grains)
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
22060019(phosphoproteome - N-starved seedlings)
21173025(root proteome)

Comparative Proteomics Data