PPDB

PPDB	The Plant Proteome Database

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AT2G01320.1 ABC-2 type transporter family protein

Lab Annot.

ABC transporter family
Mapman: 34.16 transport.ABC transporters and multidrug resistance systems

Curated Location

envelope (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G01320.4 11 Arabidopsis thaliana 0 725 100 100 48 (48) _
AT2G01320.2 11 Arabidopsis thaliana 0 724 100 100 48 (48) _
AT2G01320.3 11 Arabidopsis thaliana 0 723 100 100 48 (48) _
Os01g03144.1 7 Oryza sativa 0 647 73 84 16 (16) S
Os11g07600.1 7 Oryza sativa 2E-90 531 34 54 0 (0) _
Os03g06139.1 7 Oryza sativa 1E-87 552 32 55 0 (0) _
GRMZM2G119345_P02 3.21 Zea mays 0 347 75 87 25 (25) _
v1_GRMZM2G119345_P02 4a53 Zea mays 0 347 75 87 22 (21) _
Zm00001eb334910_P003 agpv5 Zea mays 0 649 74 85 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA(1) AAA_16(1) AAA_18(1) AAA_21(2) AAA_22(1) AAA_23(1) AAA_25(1) AAA_28(1) AAA
TargetP:	Cytoplasm (Class 4 C0.009; M0.144; S0.482; _0.693)
Predotar:
Subcel. Location:
TM-HMM prediction:	4 TMs
Aramemnon:	4 TMs
TAT position:
Length	725 aa (-cTP 690)
Molecular Weight	78.90 kDA(-cTP )
PI	5.71(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
738	Detail								[A. thaliana]
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1345	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 1)
1347	Detail								leaf [A. thaliana]	total tissue (5 day HL)	wild-type (rep. 3)
1348	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 1)
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1403	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1432	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1453	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1619	Detail								[A. thaliana]		m48
1620	Detail								[A. thaliana]		m48
1621	Detail								[A. thaliana]		m48
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
20061580(chloroplast envelope (inner+outer))
22060019(phosphoproteome - N-starved seedlings)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data