PPDB

The Plant Proteome Database

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AT2G01250.2   Ribosomal protein L30/L7 family protein

Lab Annot. 60S ribosomal protein L7 (RPL7B) (uL30y)
Mapman: 29.2.1.2.2.7 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G01250.1 11Arabidopsis thaliana1E-1181779797451 (335)_
AT3G13580.5 11Arabidopsis thaliana3E-10617687920 (0)_
AT3G13580.1 11Arabidopsis thaliana3E-1061768792146 (95)_
Os04g51630.2 7Oryza sativa3E-83168748841 (41)_
Os04g51630.1 7Oryza sativa3E-83168748841 (41)_
Os08g13690.1 7Oryza sativa7E-82163748851 (51)_
v1_GRMZM2G094051_P03 4a53Zea mays2E-891707588102 (100)_
v1_GRMZM2G094051_P04 4a53Zea mays2E-891707588102 (100)_
GRMZM2G094051_P03 3.21Zea mays2E-891707588131 (119)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ribosomal_L30(2) Ribosomal_L30_N(1)
TargetP: Cytoplasm (Class 2 C0.127; M0.090; S0.051; _0.902)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 184 aa (-cTP 182)
Molecular Weight 21.55 kDA(-cTP )
PI 10.09(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1409Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.1 wild-type
1413Detail       leaf [A. thaliana] total leaf tissue -114 rep1tR1 wild-type
1415Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.1 clpr2-1
1416Detail       leaf [A. thaliana] total leaf tissue 1.14 rep 1.2 clpr2-1
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1621Detail        [A. thaliana] m48
2182Detail       Rosettes [A. thaliana] total soluble tic40 and wt
2244Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17934214(cytosolic ribosome)
17293592(total seedlings û light and dark grown)
17151019(vacuole - suspension cell)
17432890(leaf total membranes)
17660356(tonoplast (Brassica oleracea buds))
18431481(chloroplast)
18931141(peroxisomes- high&low purity (cell culture))
18931141(peroxisomes-high purity (cell culture))
19200160(flower-stage 12)
19546170(mature pollen grains)
19429840(ubiquitinated or associated with ubiquitinated proteins (seedlings))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19334764(plasma membrane (cell culture))
20423899(chloroplast)
19888209(80S polysomal fraction)
19888209(leaves)
19329564(peroxisomes (leaf))
19114538(guard cells Arabidopsis leaf)
19423572(leaf (wt and clpr2-1))
21325567(root-proteome (wt & det3))
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)
20813957(SUMO proteome)
22430844(Golgi-cell-culture)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data


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