PPDB

PPDB	The Plant Proteome Database

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AT2G01080.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G27080.2 11 Arabidopsis thaliana 4E-08 236 22 46 0 (0) _
AT2G27080.1 11 Arabidopsis thaliana 4E-08 236 22 46 0 (0) _
AT4G23930.1 11 Arabidopsis thaliana 1E-07 180 22 43 0 (0) S
Os03g15630.1 7 Oryza sativa 2E-74 226 57 72 0 (0) _
Os04g33990.1 7 Oryza sativa 7E-10 174 28 46 4 (4) S
Os09g26480.1 7 Oryza sativa 2E-09 111 33 51 0 (0) _
GRMZM2G069606_P01 3.21 Zea mays 8E-67 168 61 76 0 (0) _
GRMZM5G805540_P01 3.21 Zea mays 8E-67 168 61 76 0 (0) _
v1_GRMZM2G069606_P01 4a53 Zea mays 8E-67 168 61 76 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3675(1) LEA_2(1) PalH(1)
TargetP:	Cytoplasm (Class 3 C0.137; M0.163; S0.022; _0.650)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	231 aa (-cTP 197)
Molecular Weight	24.76 kDA(-cTP )
PI	9.18(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
17644812(plasma membrane - suspension cells)
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
20843791(DRM-enriched plasmamembrane)

Comparative Proteomics Data