PPDB

The Plant Proteome Database

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AT1G80880.1   Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80880.3 11Arabidopsis thaliana05401001000 (0)C
AT1G80880.2 11Arabidopsis thaliana05401001000 (0)C
AT5G15010.1 11Arabidopsis thaliana9E-8140035580 (0)M
Os08g17080.1 7Oryza sativa3E-12939546660 (0)M
Os01g60010.1 7Oryza sativa5E-8047032530 (0)M
Os01g05860.1 7Oryza sativa8E-4042724500 (0)M
Zm00001eb176370_P001 agpv5Zea mays2E-12540445650 (0)M
v1_GRMZM2G123959_P01 4a53Zea mays2E-12540445650 (0)M
GRMZM2G123959_P01 3.21Zea mays2E-12540445650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PPR(9) PPR_1(6) PPR_2(10) PPR_3(5) PPR_long(4)
TargetP: Chloroplast (Class 5 C0.720; M0.578; S0.001; _0.010)
Predotar:
Subcel. Location: Lumen
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 540 aa (-cTP 453) (-lTP 474)
Molecular Weight 61.71 kDA(-cTP 52.04)(-lTP 54.37)
PI 7.91(-cTP 5.96)(-lTP 5.962)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


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