PPDB

 The Plant Proteome Database

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AT1G80770.1   P-loop containing nucleoside triphosphate hydrolases superfamily protein
Lab Annot. P-loop containing nucleoside triphosphate hydrolases protein
Mapman: 35.1 not assigned.no ontology
Curated Location plastid (Pubmed: 23198870 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80770.6 11Arabidopsis thaliana048293930 (0)C
AT1G80770.4 11Arabidopsis thaliana0424991000 (0)C
AT1G80770.5 11Arabidopsis thaliana045592930 (0)C
Os08g06230.1 7Oryza sativa3E-16535863811 (1)C
Os07g01920.1 7Oryza sativa7E-3029027480 (0)_
Os06g09570.1 7Oryza sativa2E-2929027480 (0)_
GRMZM2G001551_P01 3.21Zea mays4E-170355638218 (17)M
Zm00001eb415700_P005 agpv5Zea mays4E-17035563820 (0)M
v1_GRMZM2G001551_P01 4a53Zea mays4E-17035563829 (9)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: FeoB_N(1) MMR_HSR1(1) MnmE_helical(1) NOG1(1) NOG1_N(1) TniB(1)
TargetP: Chloroplast (Class 5 C0.526; M0.383; S0.006; _0.019)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 451 aa (-cTP 393)
Molecular Weight 50.41 kDA(-cTP 43.93)
PI 8.87(-cTP 8.28)

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1215Detail       leaf [A. thaliana] co-IP ClpR2 stromawild-type
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
2301Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 21515685(GreenCut2)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help