PPDB

 The Plant Proteome Database

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AT1G80750.1   Ribosomal protein L30/L7 family protein
Lab Annot. 60S ribosomal protein L7 (RPL7A)
Mapman: 29.2.1.2.2.7 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L7
Curated Location cytosol
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G13580.5 11Arabidopsis thaliana1E-6224742630 (0)_
AT3G13580.1 11Arabidopsis thaliana1E-622474263144 (102)_
AT3G13580.4 11Arabidopsis thaliana1E-6224742630 (0)_
Os08g42920.1 7Oryza sativa3E-7724852679 (9)_
Os04g51630.2 7Oryza sativa2E-59247406141 (41)_
Os04g51630.1 7Oryza sativa2E-59247406141 (41)_
Zm00001eb198430_P001 agpv5Zea mays2E-6624646650 (0)_
AC190609.3_FGP003 3.21Zea mays2E-6624646650 (0)_
v1_AC190609.3_FGP003 4a53Zea mays2E-6624646650 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Ribosomal_L30(1) Ribosomal_L30_N(1)
TargetP: Cytoplasm (Class 2 C0.097; M0.136; S0.043; _0.927)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 247 aa (-cTP 231)
Molecular Weight 28.34 kDA(-cTP )
PI 9.74(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1408Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1412Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 clpr2-1
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1758Detail       leaf [A. thaliana] total leaf tissue DXS_Flag+fosmidomycin
1932Detail       leaf [A. thaliana] total leaf tissue DXS_Flag
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2013Detail       leaf [A. thaliana] total leaf tissue wt
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2017Detail       leaf [A. thaliana] total leaf tissue wild-type
2018Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2019Detail       leaf [A. thaliana] total leaf tissue opda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2320Detail        [A. thaliana] Thylakoids plastoglobule 
2321Detail       leaf [A. thaliana]  
2324Detail       leaf [A. thaliana] THYLAKOIDS thylakoid membrane 
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

 15496452(nucleolus)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help