PPDB

The Plant Proteome Database

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AT1G80570.1   RNI-like superfamily protein

Lab Annot. RNI-like protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80570.2 11Arabidopsis thaliana04671001000 (0)_
AT1G80570.3 11Arabidopsis thaliana04671001000 (0)_
AT5G23340.1 11Arabidopsis thaliana2E-1640727380 (0)_
Os04g30210.1 7Oryza sativa7E-10247239580 (0)_
Os04g30200.1 7Oryza sativa2E-10047040570 (0)_
Os12g33230.1 7Oryza sativa2E-9847440580 (0)_
Zm00001eb165480_P002 agpv5Zea mays8E-2437428470 (0)_
v1_GRMZM2G139872_P01 4a53Zea mays4E-2337028470 (0)_
Zm00001eb165480_P001 agpv5Zea mays4E-2337028470 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(2) F-box-like(1) F-box_5(1) LRR_4(7) LRR_6(7)
TargetP: Cytoplasm (Class 3 C0.331; M0.061; S0.026; _0.820)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 467 aa (-cTP 421)
Molecular Weight 52.18 kDA(-cTP )
PI 6.20(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help