PPDB

The Plant Proteome Database

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AT1G80550.1   Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.
Mapman: 35.1.5 not assigned.no ontology.pentatricopeptide (PPR) repeat-containing protein
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G15010.1 11Arabidopsis thaliana2E-6040831500 (0)M
AT3G15200.1 11Arabidopsis thaliana2E-5339429500 (0)M
AT1G77360.2 11Arabidopsis thaliana2E-4939629510 (0)M
Os04g55090.2 7Oryza sativa6E-14240148680 (0)M
Os04g55090.1 7Oryza sativa6E-14240148680 (0)M
Os01g05860.1 7Oryza sativa5E-6739731520 (0)M
Zm00001eb068720_P001 agpv5Zea mays1E-14139948680 (0)M
GRMZM2G023071_P01 3.21Zea mays1E-14139948680 (0)M
v1_GRMZM2G023071_P01 4a53Zea mays1E-14139948680 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ECSIT(3) PPR(11) PPR_1(7) PPR_2(11) PPR_3(7) PPR_long(4)
TargetP: Mitochondria (Class 1 C0.044; M0.908; S0.038; _0.065)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 448 aa (-cTP 413)
Molecular Weight 52.51 kDA(-cTP )
PI 8.34(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help