PPDB

The Plant Proteome Database

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AT1G80420.1   BRCT domain-containing DNA repair protein

Lab Annot. BRCT domain-containing DNA repair protein
Mapman: 28.2 DNA.repair
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80420.2 11Arabidopsis thaliana03531001000 (0)C
AT1G80420.5 11Arabidopsis thaliana03531001000 (0)C
AT1G80420.3 11Arabidopsis thaliana03531001000 (0)C
Os06g05190.1 7Oryza sativa9E-11136048660 (0)_
v1_GRMZM2G146490_P01 4a53Zea mays5E-10236748630 (0)_
Zm00001eb377280_P002 agpv5Zea mays5E-10236748630 (0)_
GRMZM2G146490_P01 3.21Zea mays5E-10236748630 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BRCT(1) BRCT_2(1) DUF2462(2) DUF4253(2) DUF755(2) PTCB-BRCT(1) RTT107_BRCT_5(1)
TargetP: Chloroplast (Class 4 C0.609; M0.145; S0.015; _0.296)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 353 aa (-cTP 344)
Molecular Weight 39.84 kDA(-cTP 38.80)
PI 5.95(-cTP 5.68)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help