PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G80390.1   indole-3-acetic acid inducible 15

Lab Annot.
Mapman: 27.3.40 RNA.regulation of transcription.Aux/IAA family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G23030.1 11Arabidopsis thaliana4E-1911643550 (0)_
AT3G23030.2 11Arabidopsis thaliana2E-1811643550 (0)S
AT5G43700.1 11Arabidopsis thaliana2E-1712840530 (0)_
Os03g43400.1 7Oryza sativa7E-1315334430 (0)_
Os01g08320.1 7Oryza sativa2E-126154670 (0)_
Os12g40900.1 7Oryza sativa8E-1213932430 (0)_
GRMZM2G147243_P01 3.21Zea mays1E-1315635440 (0)_
v1_GRMZM2G147243_P01 4a53Zea mays1E-1315635440 (0)_
GRMZM2G147243_P02 3.21Zea mays3E-1315635440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AUX_IAA(3)
TargetP: Cytoplasm (Class 2 C0.195; M0.086; S0.097; _0.844)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 129 aa (-cTP 66)
Molecular Weight 14.35 kDA(-cTP )
PI 7.73(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help