PPDB

PPDB	The Plant Proteome Database

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AT1G80360.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Lab Annot.

aminotransferase class I and II protein
Mapman: 13.1.6.2 amino acid metabolism.synthesis.aromatic aa.phenylalanine and tyrosine

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G80360.4 11 Arabidopsis thaliana 0 394 100 100 0 (0) M
AT1G80360.3 11 Arabidopsis thaliana 0 394 100 100 0 (0) M
AT1G80360.2 11 Arabidopsis thaliana 0 394 100 100 0 (0) M
Os01g08270.1 7 Oryza sativa 0 394 66 84 0 (0) _
Os01g08270.4 7 Oryza sativa 1E-103 208 64 85 0 (0) _
Os01g65090.2 7 Oryza sativa 2E-34 347 28 47 16 (16) _
v1_GRMZM2G107639_P02 4a53 Zea mays 0 394 66 83 5 (5) _
Zm00001eb122460_P003 agpv5 Zea mays 0 394 65 82 0 (0) _
Zm00001eb122460_P001 agpv5 Zea mays 0 394 65 82 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Alliinase_C(1) Aminotran_1_2(1) Beta_elim_lyase(1) Cys_Met_Meta_PP(1)
TargetP:	Mitochondria (Class 4 C0.071; M0.621; S0.030; _0.374)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	394 aa (-cTP 375)
Molecular Weight	43.76 kDA(-cTP )
PI	5.97(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
356	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
621	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
1411	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 1.1	clpr2-1
1414	Detail								leaf [A. thaliana]	total leaf tissue -114 rep1tR2	wild-type
1416	Detail								leaf [A. thaliana]	total leaf tissue 1.14 rep 1.2	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)
1708	Detail								[A. thaliana]		Wild-type
1765	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
1936	Detail								leaf [A. thaliana]	chloroplast	Prep1_Prep2
1986	Detail								leaf [A. thaliana]	plastid	Prep1_Prep2
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2300	Detail								[A. thaliana]		Clp C1 TRAP
2301	Detail								[A. thaliana]		Clp C1 TRAP
2303	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

16358359(cell suspension (Gamborg))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19816138(rosette leaves)
19888209(leaves)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data