PPDB

PPDB	The Plant Proteome Database

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AT1G80270.1 PENTATRICOPEPTIDE REPEAT 596

Lab Annot.

DNA binding protein, PPR repeat
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G80270.5 11 Arabidopsis thaliana 0 596 100 100 0 (0) M
AT1G80270.4 11 Arabidopsis thaliana 0 596 100 100 0 (0) M
AT1G80270.2 11 Arabidopsis thaliana 0 596 100 100 0 (0) M
Os12g07260.1 7 Oryza sativa 0 555 47 70 1 (1) M
Os01g17320.1 7 Oryza sativa 0 546 47 71 0 (0) M
Os07g12140.1 7 Oryza sativa 1E-139 467 43 65 0 (0) M
GRMZM2G005980_P01 3.21 Zea mays 0 558 49 68 13 (13) M
Zm00001eb332580_P001 agpv5 Zea mays 0 558 49 68 0 (0) M
v1_GRMZM2G005980_P01 4a53 Zea mays 0 558 49 68 19 (19) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	DUF3368(3) Imm51(2) Mtf2(1) PPR(8) PPR_1(6) PPR_2(8) PPR_3(5) PPR_long(4) SPOB_a
TargetP:	Mitochondria (Class 2 C0.082; M0.870; S0.005; _0.040)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	596 aa (-cTP 531)
Molecular Weight	67.28 kDA(-cTP )
PI	7.52(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

12938931(Total chloroplast envelope)
18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
20706207(contaminants cell cycle interactome (cell culture))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data