PPDB

The Plant Proteome Database

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AT1G80230.1   Rubredoxin-like superfamily protein

Lab Annot. cytochrome oxidase
Mapman: 9.7 mitochondrial electron transport / ATP synthesis.cytochrome c oxidase
Curated Location mitochondria

TAIR curated location: mitochondrion14671022,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT3G15640.1 11Arabidopsis thaliana2E-66160687963 (62)M
AT3G15640.2 11Arabidopsis thaliana1E-64160688063 (62)M
AT1G52710.1 11Arabidopsis thaliana6E-398870790 (0)_
Os06g05080.1 7Oryza sativa8E-5212664733 (3)M
Os01g42650.1 7Oryza sativa4E-4491748627 (27)M
GRMZM2G134738_P01 3.21Zea mays1E-3892738838 (38)M
v1_GRMZM2G134738_P01 4a53Zea mays1E-3892738836 (35)M
Zm00001eb358050_P001 agpv5Zea mays1E-389273880 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: COX5B(1) zf-CHCC(1)
TargetP: Chloroplast (Class 4 C0.573; M0.251; S0.054; _0.005)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 171 aa (-cTP 113)
Molecular Weight 18.58 kDA(-cTP 12.50)
PI 5.44(-cTP 4.61)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1622Detail        [A. thaliana] m48

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18385124(mitochondria - leaf and suspension cell)
18385124(mitochondria)
18931141(peroxisomes- high&low purity (cell culture))
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data


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