PPDB

PPDB	The Plant Proteome Database

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AT1G80140.1 Pectin lyase-like superfamily protein

Lab Annot.

Mapman: 10.6.3 cell wall.degradation.pectate lyases and polygalacturonases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G70500.1 11 Arabidopsis thaliana 2E-80 337 40 58 0 (0) S
AT3G15720.2 11 Arabidopsis thaliana 2E-75 311 42 59 0 (0) S
AT4G35670.1 11 Arabidopsis thaliana 3E-75 307 41 59 0 (0) S
Os07g10680.1 7 Oryza sativa 2E-76 334 40 55 0 (0) S
Os05g46510.1 7 Oryza sativa 4E-76 341 38 56 0 (0) S
Os01g19170.1 7 Oryza sativa 6E-76 347 38 58 0 (0) S
Zm00001eb231160_P001 agpv5 Zea mays 5E-76 347 37 55 0 (0) S
GRMZM5G831200_P01 3.21 Zea mays 5E-76 347 37 55 0 (0) S
GRMZM2G092746_P01 3.21 Zea mays 5E-76 341 39 56 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Beta_helix(1) Glyco_hydro_28(1) Pectate_lyase_3(1) Pectate_lyase_4(1)
TargetP:	Secreted (Class 4 C0.018; M0.108; S0.670; _0.276)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	336 aa (-cTP 303)
Molecular Weight	36.04 kDA(-cTP )
PI	5.90(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

15815986(Leaf)

Comparative Proteomics Data