PPDB

 The Plant Proteome Database

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AT1G80030.1   Molecular chaperone Hsp40/DnaJ family protein
Lab Annot. J-domain protein DjA7 (type 1)
Mapman: 26.29* misc.DnaJ domain with unknown function
Curated Location thylakoid (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80030.2 11Arabidopsis thaliana050010010095 (75)C
AT1G80030.3 11Arabidopsis thaliana050010010095 (75)C
AT1G80030.4 11Arabidopsis thaliana04861001000 (0)C
Os02g56040.1 7Oryza sativa0435698320 (20)C
Os05g26902.1 7Oryza sativa1E-131442496431 (31)M
Os05g26914.1 6Oryza sativa1E-131442496415 (15)M
v1_GRMZM2G054076_P01 4a53Zea mays0400678034 (34)C
GRMZM2G054076_P01 3.21Zea mays040067809 (9)C
Zm00001eb192080_P001 agpv5Zea mays040067800 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Anti-TRAP(2) DnaJ(1) DnaJ_C(1) DnaJ_CXXCXGXG(1) DUF5351(4) DZR(1)
TargetP: Chloroplast (Class 1 C0.964; M0.009; S0.101; _0.011)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 500 aa (-cTP 408)
Molecular Weight 53.82 kDA(-cTP 44.17)
PI 7.49(-cTP 5.61)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
105Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
107Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
324Detail       leaf [A. thaliana] cell wall enriched wild-type
327Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
343Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
640Detail       leaf [A. thaliana] plastid nucleoid wild-type
876Detail       leaf [A. thaliana] chloroplast thylakoid membranewild-type
1043Detail       leaf [A. thaliana] plastid - coIP thylakoid membrane 
1122Detail       leaf [A. thaliana] chloroplast plastoglobulewild-type
1126Detail       leaf [A. thaliana] chloroplast plastoglobulek2k3
1260Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 1) thylakoid membranewild-type
1265Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 3) thylakoid membraneshoot1 (null mutant)
1399Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1407Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. clpr2-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1424Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 1)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
1432Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1440Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 2)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1445Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 1)
1446Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 2)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1448Detail       leaf [A. thaliana] total tissue (3 day HL) abck2xabck3 (rep. 1)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1454Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 2)
1507Detail        [A. thaliana] wild-type
1525Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1528Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1580Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1581Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1582Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1583Detail       leaf [A. thaliana] TiO2 thylakoid membraneK2K3
1612Detail       Natural Senescence leaf [A. thaliana] chloroplast fractionation thylakoid membrane 
1619Detail        [A. thaliana] m48
1620Detail        [A. thaliana] m48
1627Detail       Rosettes [A. thaliana] total leaf tissue thylakoid + envelopeWild-type
1641Detail       leaf [A. thaliana] total tissue shoot1 mutant
1643Detail       leaf [A. thaliana] total leaf tissue Wild-type
1650Detail       leaf [A. thaliana] plastoglobules plastoglobulem48
1707Detail        [A. thaliana] sht1
1708Detail        [A. thaliana] Wild-type
1831Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Normal light
1984Detail       leaf [A. thaliana] plastid wild-type
2133Detail       leaf [A. thaliana] chloroplast fractionation MSH1
2291Detail        [A. thaliana] Clp C1 TRAP
2298Detail        [A. thaliana] Clp C1 WT
2304Detail        [A. thaliana] Clp C1 WT
2307Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

 15322131(Thylakoid-stripped)
18431481(chloroplast)
19525416(leaf (wt and clpr4-1 mutant))
19114538(guard cells Arabidopsis leaf)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
21311031(chloroplasts)

Comparative Proteomics Data

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