PPDB

PPDB	The Plant Proteome Database

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AT1G79950.1 RAD3-like DNA-binding helicase protein

Lab Annot.

helicase-related
Mapman: 28.1 DNA.synthesis/chromatin structure

Curated Location

TAIR curated location: mitochondrion14671022

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G79950.6 11 Arabidopsis thaliana 0 1040 98 98 0 (0) M
AT1G79950.5 11 Arabidopsis thaliana 0 806 100 100 0 (0) M
AT1G79950.4 11 Arabidopsis thaliana 0 806 100 100 0 (0) M
Os01g40980.1 7 Oryza sativa 0 1041 48 63 0 (0) _
Os01g40980.2 7 Oryza sativa 0 718 58 72 0 (0) _
Os09g37920.1 7 Oryza sativa 8E-110 824 32 49 0 (0) _
GRMZM2G154839_P02 3.21 Zea mays 0 619 57 72 0 (0) _
Zm00001eb161030_P001 agpv5 Zea mays 0 1039 48 64 0 (0) _
v1_GRMZM2G154839_P01 4a53 Zea mays 0 822 54 70 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CCM2_C(1) DEAD(2) DEAD_2(1) Helicase_C_2(1) PAH(1) ResIII(2) SNF2_N(1)
TargetP:	Mitochondria (Class 5 C0.151; M0.586; S0.026; _0.422)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1040 aa (-cTP 1003)
Molecular Weight	116.63 kDA(-cTP )
PI	8.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
18463617(suspension cells-phosphorylated proteins)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data