PPDB

 The Plant Proteome Database

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AT1G79880.1   RNA recognition motif (RRM)-containing protein
Lab Annot.
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G79880.2 11Arabidopsis thaliana03451001001 (1)_
AT1G79880.3 11Arabidopsis thaliana035796961 (1)_
AT4G32720.2 11Arabidopsis thaliana9E-95400425937 (27)_
Os04g42010.1 7Oryza sativa9E-9039942627 (7)_
Os02g39700.1 7Oryza sativa3E-8440739570 (0)_
Os01g55170.1 7Oryza sativa5E-1317730470 (0)_
v1_GRMZM2G014750_P02 4a53Zea mays3E-9043039584 (4)_
GRMZM2G014750_P02 3.21Zea mays3E-9043039584 (4)_
Zm00001eb246770_P001 agpv5Zea mays1E-8943039580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Intimin_C(1) La(1) RRM_1(2) RRM_3(2)
TargetP: Cytoplasm (Class 2 C0.178; M0.018; S0.032; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 399 aa (-cTP 327)
Molecular Weight 44.93 kDA(-cTP )
PI 6.25(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1948Detail       leaf [A. thaliana] stroma ClpS stromaclpS

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help