PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT1G79830.1   golgin Putative 5

Lab Annot. golgin candidate 5
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G79830.3 11Arabidopsis thaliana09561001008 (5)_
AT1G79830.2 11Arabidopsis thaliana095610010012 (9)_
AT1G79830.5 11Arabidopsis thaliana0956991000 (0)_
Os05g48620.1 7Oryza sativa01049516718 (18)_
Zm00001eb295600_P001 agpv5Zea mays062569840 (0)_
Zm00001eb343520_P004 agpv5Zea mays050867820 (0)_
Zm00001eb343520_P001 agpv5Zea mays050667820 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Seryl_tRNA_N(6) TMF_DNA_bd(9) TMF_TATA_bd(5)
TargetP: Cytoplasm (Class 3 C0.080; M0.174; S0.173; _0.672)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 956 aa (-cTP 867)
Molecular Weight 108.35 kDA(-cTP )
PI 4.80(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
2112Detail       leaf [A. thaliana] Stroma stromawt
2250Detail       seedlings [A. thaliana] total tissue atg5
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2311Detail       leaf [A. thaliana] PG plastoglobule 

* For details about the exprimental sources click here.

Published Proteomics Data

14617066(Nuclear proteome)
18463617(suspension cells-phosphorylated proteins)
19546170(mature pollen grains)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help