PPDB

PPDB	The Plant Proteome Database

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AT1G79700.1 Integrase-type DNA-binding superfamily protein

Lab Annot.

Integrase-type DNA-binding protein
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G79700.2 11 Arabidopsis thaliana 0 313 96 96 0 (0) C
AT1G79700.3 11 Arabidopsis thaliana 5E-159 228 95 95 0 (0) _
AT1G79700.4 11 Arabidopsis thaliana 9E-157 226 95 95 0 (0) _
Os06g05340.1 7 Oryza sativa 1E-76 197 66 79 0 (0) _
Os11g03540.1 7 Oryza sativa 1E-73 172 73 81 0 (0) C
Os05g45954.1 7 Oryza sativa 7E-73 193 66 75 0 (0) _
GRMZM2G141219_P01 3.21 Zea mays 1E-92 192 77 85 0 (0) C
v1_GRMZM2G141219_P01 4a53 Zea mays 1E-92 192 77 85 0 (0) C
Zm00001eb313350_P002 agpv5 Zea mays 1E-92 192 77 85 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AP2(2) Glyco_hydro_98M(1)
TargetP:	Chloroplast (Class 4 C0.788; M0.028; S0.016; _0.480)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	303 aa (-cTP 254)
Molecular Weight	34.24 kDA(-cTP 28.96)
PI	6.56(-cTP 5.29)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data