PPDB

PPDB	The Plant Proteome Database

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AT1G79540.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G62670.1 11 Arabidopsis thaliana 9E-70 482 29 50 0 (0) M
AT1G62670.2 11 Arabidopsis thaliana 9E-70 482 29 50 0 (0) M
AT3G53700.1 11 Arabidopsis thaliana 1E-68 618 27 46 59 (51) C
Os09g02260.1 7 Oryza sativa 0 702 42 60 0 (0) M
Os07g20510.1 7 Oryza sativa 2E-70 652 27 48 0 (0) M
Os03g06910.1 7 Oryza sativa 8E-67 474 29 50 0 (0) M
Zm00001eb221750_P001 agpv5 Zea mays 3E-178 773 39 56 0 (0) _
AC210169.3_FGP002 3.21 Zea mays 3E-178 773 39 56 0 (0) _
v1_AC210169.3_FGP002 4a53 Zea mays 3E-178 773 39 56 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	B12-binding_2(3) BTAD(3) ECSIT(2) MRP-S27(6) PPR(15) PPR_1(14) PPR_2(16) PPR_3(8
TargetP:	Mitochondria (Class 3 C0.009; M0.585; S0.075; _0.149)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	780 aa (-cTP 682)
Molecular Weight	88.85 kDA(-cTP )
PI	8.44(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data