PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT1G79490.1 Pentatricopeptide repeat (PPR) superfamily protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G18900.4 11 Arabidopsis thaliana 3E-50 504 26 48 0 (0) M
AT1G18900.2 11 Arabidopsis thaliana 3E-50 504 26 48 0 (0) M
AT1G18900.1 11 Arabidopsis thaliana 3E-50 504 26 48 0 (0) M
Os04g52290.1 7 Oryza sativa 0 745 59 76 0 (0) M
Os12g44170.1 7 Oryza sativa 4E-44 543 24 46 0 (0) M
Os02g16650.1 7 Oryza sativa 5E-41 550 23 43 0 (0) M
Zm00001eb071030_P001 agpv5 Zea mays 0 741 58 75 0 (0) M
v1_GRMZM2G345667_P01 4a53 Zea mays 0 741 58 75 0 (0) M
v1_GRMZM2G345667_P02 4a53 Zea mays 0 741 58 75 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ATP13(3) DUF3368(5) MNE1(3) PPR(11) PPR_1(6) PPR_2(13) PPR_3(6) PPR_long(3) TPR_
TargetP:	Chloroplast (Class 5 C0.529; M0.481; S0.003; _0.021)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	836 aa (-cTP 751)
Molecular Weight	94.17 kDA(-cTP 84.62)
PI	9.18(-cTP 8.86)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data