PPDB

 The Plant Proteome Database

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AT1G79410.1   organic cation/carnitine transporter5
Lab Annot. Organic cation/carnitine transporter
Mapman: 34.2 transport.sugars
Curated Location vacuole-tonoplast (Pubmed: 21988472 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16370.1 11Arabidopsis thaliana052171860 (0)_
AT1G79360.1 11Arabidopsis thaliana2E-15052743640 (0)_
AT1G16390.1 11Arabidopsis thaliana2E-13051939600 (0)_
Os07g37510.1 7Oryza sativa5E-12251539590 (0)_
Os07g37530.2 7Oryza sativa3E-11353636570 (0)_
Os07g37530.1 7Oryza sativa3E-11353636570 (0)_
GRMZM2G019974_P01 3.21Zea mays6E-11851339580 (0)_
v1_GRMZM2G019974_P01 4a53Zea mays6E-11851339580 (0)_
Zm00001eb324230_P001 agpv5Zea mays6E-11851339580 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DUF5504(2) MFS_1(2) Sugar_tr(1)
TargetP: Cytoplasm (Class 1 C0.051; M0.027; S0.127; _0.977)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 10 TMs
TAT position:
Length 515 aa (-cTP 454)
Molecular Weight 57.15 kDA(-cTP )
PI 8.16(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help