PPDB

PPDB	The Plant Proteome Database

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AT1G79320.1 metacaspase 6

Lab Annot.

metacaspase 6 (type II)
Mapman: 29.5.3.2.2* protein.degradation.cysteine protease.CD.C14

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G79330.1 11 Arabidopsis thaliana 0 415 67 76 8 (7) _
AT1G79340.1 11 Arabidopsis thaliana 3E-172 422 62 71 110 (62) _
AT1G79310.1 11 Arabidopsis thaliana 1E-155 412 57 72 0 (0) _
Os01g58580.1 7 Oryza sativa 1E-144 420 53 67 2 (2) _
Os05g41670.1 7 Oryza sativa 2E-144 426 52 65 18 (18) M
Os05g41660.1 7 Oryza sativa 7E-108 421 43 60 0 (0) _
GRMZM2G047274_P01 3.21 Zea mays 5E-141 420 52 66 30 (30) _
v1_GRMZM2G047274_P01 4a53 Zea mays 5E-141 420 52 66 27 (27) _
Zm00001eb150730_P001 agpv5 Zea mays 5E-141 420 52 66 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ApoLp-III(1) DUF5760(1) Ligase_CoA(1) Peptidase_C14(1) Raptor_N(2)
TargetP:	Cytoplasm (Class 5 C0.092; M0.273; S0.157; _0.447)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	368 aa (-cTP 352)
Molecular Weight	40.24 kDA(-cTP )
PI	4.68(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data