PPDB

 The Plant Proteome Database

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AT1G79060.1   TPRXL
Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G56020.1 11Arabidopsis thaliana4E-7439546600 (0)C
AT3G12970.1 11Arabidopsis thaliana6E-5939041530 (0)C
AT3G05980.1 11Arabidopsis thaliana2E-0617030450 (0)_
Os06g46250.1 7Oryza sativa4E-4240337470 (0)C
Os02g06960.1 7Oryza sativa9E-2834936460 (0)C
Os04g52800.1 7Oryza sativa3E-128643620 (0)_
v1_GRMZM2G166430_P01 4a53Zea mays5E-4440137490 (0)C
Zm00001eb224830_P001 agpv5Zea mays5E-4440137490 (0)C
GRMZM2G166430_P01 3.21Zea mays5E-4440137490 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM:
TargetP: Cytoplasm (Class 5 C0.362; M0.127; S0.144; _0.443)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 396 aa (-cTP 357)
Molecular Weight 42.51 kDA(-cTP )
PI 9.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help