PPDB

PPDB	The Plant Proteome Database

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AT1G79050.1 recA DNA recombination family protein

Lab Annot.

DNA repair protein recA
Mapman: 28.2 DNA.repair

Curated Location

plastid stroma (Pubmed: 23198870 17468263 20406785 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G79050.2 11 Arabidopsis thaliana 0 337 99 99 48 (21) C
AT2G19490.1 11 Arabidopsis thaliana 2E-91 325 49 70 2 (1) M
AT3G10140.1 11 Arabidopsis thaliana 1E-55 334 38 60 0 (0) M
Os03g43850.1 7 Oryza sativa 0 369 83 90 0 (0) C
Os01g67510.1 7 Oryza sativa 9E-87 360 45 66 0 (0) M
Os11g19720.1 7 Oryza sativa 1E-78 358 42 63 0 (0) M
GRMZM2G016602_P04 3.21 Zea mays 0 382 78 86 10 (10) C
Zm00001eb050740_P001 agpv5 Zea mays 0 382 78 86 0 (0) C
GRMZM2G016602_P03 3.21 Zea mays 0 364 82 90 10 (10) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_24(1) AAA_25(1) AAA_35(1) ABC_tran(1) ATPase(2) ATPase_2(1) PAXNEB(1) Rad51(
TargetP:	Chloroplast (Class 2 C0.841; M0.057; S0.024; _0.123)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	439 aa (-cTP 388)
Molecular Weight	47.73 kDA(-cTP 41.99)
PI	6.00(-cTP 5.60)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
541	Detail								leaf [A. thaliana]	stroma (FPLC) >1 MDa stroma	wild-type
542	Detail								leaf [A. thaliana]	stroma (FPLC) >500 kDa (HMB)	wild-type
543	Detail								leaf [A. thaliana]	stroma (FPLC) >600 kDa (HMA)	wild-type
640	Detail								leaf [A. thaliana]	plastid nucleoid	wild-type
1175	Detail								leaf [A. thaliana]	co-IP RH3 stroma	wild-type
1178	Detail								leaf [A. thaliana]	co-IP RH3 stroma	clpr2-1
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1525	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1637	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1638	Detail								leaf [A. thaliana]	total leaf tissue stroma	Wild-type
1639	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
1640	Detail								leaf [A. thaliana]	total leaf tissue stroma	clpt2-1
2269	Detail								seedlings [A. thaliana]	total tissue	wild-type
2273	Detail								seedlings [A. thaliana]	total tissue	wild-type
2290	Detail								[A. thaliana]		Clp C1 TRAP
2291	Detail								[A. thaliana]		Clp C1 TRAP
2296	Detail								[A. thaliana]		Clp C1 WT
2306	Detail								[A. thaliana]		Clp C1 TRAP
2312	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
20423899(chloroplast)
19995723(chloroplast reference proteome)

Comparative Proteomics Data