PPDB

 The Plant Proteome Database

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AT1G79010.1   Alpha-helical ferredoxin
Lab Annot. NADH-ubiquinone oxidoreductase 23 kDa subunit, mitochondrial
Mapman: 9.1.2 mitochondrial electron transport / ATP synthesis.NADH-DH.localisation not clear
Curated Location mitochondria

TAIR curated location: mitochondrion12837548,14671022,12606038,11743115
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G16700.1 11Arabidopsis thaliana1E-15722294967 (7)M
ATCG01090.1 11Arabidopsis thaliana1E-151243550253 (177)M
Os03g56300.1 7Oryza sativa4E-124206838722 (22)M
Os10g21398.1 7Oryza sativa1E-14124335013 (13)M
Osp1g00950.1 7Oryza sativa2E-14124335037 (37)M
AC195340.3_FGP002 3.21Zea mays2E-12520684897 (7)M
v1_AC195340.3_FGP002 4a53Zea mays2E-12520684897 (6)M
GRMZM2G072806_P01 3.21Zea mays5E-12019986916 (6)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: c-SKI_SMAD_bind(2) EPF(2) ETF_QO(2) Fer4(2) Fer4_10(2) Fer4_13(2) Fer4_16(2) Fer
TargetP: Mitochondria (Class 1 C0.040; M0.949; S0.025; _0.027)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 222 aa (-cTP 201)
Molecular Weight 25.50 kDA(-cTP )
PI 5.32(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
325Detail       BY2 cell suspension [Tobacco] cell wall enriched wild-type
352Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1345Detail       leaf [A. thaliana] total tissue (5 day HL) wild-type (rep. 1)
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1425Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 2)
1439Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1744Detail        [A. thaliana] Mep-6
1745Detail        [A. thaliana] Col-0
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
2247Detail       seedlings [A. thaliana] total tissue atg5
2248Detail       seedlings [A. thaliana] total tissue wild-type
2249Detail       seedlings [A. thaliana] total tissue gfs9
2250Detail       seedlings [A. thaliana] total tissue atg5
2251Detail       seedlings [A. thaliana] total tissue wild-type
2253Detail       seedlings [A. thaliana] total tissue atg5
2269Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 MitoDB(Mitochondrial proteome)
12837548(mitochondria-complex_I)
12606038(Mitochondria-metalbinding)
19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
20197505(mitochondria Complex I (leaf))
21311031(mitochondria)
21841088(mitochondria (2DE native gel))
21173025(root proteome)
21472856(mitochondrial-2DEgels-uncurated)
21472856(mitochondria-LC-MS/MS-uncurated)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)

Comparative Proteomics Data

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