PPDB

The Plant Proteome Database

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AT1G78970.1   lupeol synthase 1

Lab Annot. LUP1 (LUPEOL SYNTHASE 1); lupeol synthase
Mapman: 16.1.5 secondary metabolism.isoprenoids.terpenoids
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78970.2 11Arabidopsis thaliana075710010012 (12)_
AT1G78970.3 11Arabidopsis thaliana07571001000 (0)_
AT1G78960.1 11Arabidopsis thaliana076079880 (0)_
Os02g04710.1 7Oryza sativa076055709 (9)M
Os11g08569.1 7Oryza sativa075953690 (0)M
Os02g04710.2 7Oryza sativa063757729 (9)S
Zm00001eb208140_P002 agpv5Zea mays075354690 (0)M
v1_GRMZM2G065494_P02 4a53Zea mays075354693 (3)M
GRMZM2G065494_P01 3.21Zea mays075354695 (5)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Pec_lyase(5) Prenyltrans(3) SQHop_cyclase_C(3) SQHop_cyclase_N(3) TED_complement
TargetP: Cytoplasm (Class 2 C0.119; M0.116; S0.056; _0.870)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon: 2 TMs
TAT position:
Length 757 aa (-cTP 717)
Molecular Weight 87.35 kDA(-cTP )
PI 6.03(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
361Detail       leaf [A. thaliana] total leaf tissue 1.07 wild-type
527Detail       leaf [A. thaliana] total leaf tissue wild-type (wt1)
1043Detail       leaf [A. thaliana] plastid - coIP thylakoid membrane 
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1614Detail       Natural Senescence leaf [A. thaliana]  
1616Detail       Natural Senescence leaf [A. thaliana]  
1766Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
1829Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1 Fluctuating light
1833Detail       leaf [A. thaliana] Thylakoids thylakoid membraneMet1-1

* For details about the exprimental sources click here.

Published Proteomics Data

19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help