PPDB

PPDB	The Plant Proteome Database

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AT1G78915.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

Tetratricopeptide repeat (TPR) protein
Mapman: 26.33* misc. tetratricopeptide repeat (TPR)

Curated Location

thylakoid (Pubmed: 23198870 18431481 ) (supported by in-house exprements)

TAIR curated location: thylakoid membrane (sensu Viridiplantae)15322131

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G78915.2 11 Arabidopsis thaliana 0 402 95 95 12 (11) C
AT1G78915.3 11 Arabidopsis thaliana 0 405 94 94 12 (11) C
AT4G39470.1 11 Arabidopsis thaliana 3E-06 240 22 42 0 (0) C
Os07g18720.1 7 Oryza sativa 2E-72 200 59 74 10 (10) _
GRMZM5G863152_P02 3.21 Zea mays 4E-130 385 54 69 41 (35) M
Zm00001eb305180_P001 agpv5 Zea mays 4E-130 385 54 69 0 (0) M
v1_GRMZM2G029698_P02 4a53 Zea mays 2E-123 304 60 75 21 (21) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) ATP-synt_E_2(2) ATP19(1) BTAD(2) NARP1(2) PPR(2) TPR_1(4) TPR_10(3) TP
TargetP:	Chloroplast (Class 3 C0.563; M0.111; S0.065; _0.049)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	385 aa (-cTP 341)
Molecular Weight	42.58 kDA(-cTP 37.71)
PI	7.66(-cTP 5.75)

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
105	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
107	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1404	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type
1830	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Col-0 Normal light
2133	Detail								leaf [A. thaliana]	chloroplast fractionation	MSH1
2310	Detail								leaf [A. thaliana]	PG plastoglobule
2311	Detail								leaf [A. thaliana]	PG plastoglobule
2318	Detail								leaf [A. thaliana]	PG plastoglobule
2320	Detail								[A. thaliana]	Thylakoids plastoglobule
2321	Detail								leaf [A. thaliana]
2324	Detail								leaf [A. thaliana]	THYLAKOIDS thylakoid membrane
2325	Detail								leaf [A. thaliana]	thylakoids thylakoid membrane	abc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

15322131(Thylakoid-stripped)
18431481(chloroplast)
19376835(leaf phosphoproteins)
19995723(chloroplast reference proteome)
21768351(Leaf-Phosphoproteome)
21515685(GreenCut2)

Comparative Proteomics Data