PPDB

The Plant Proteome Database

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AT1G78840.1   F-box/RNI-like/FBD-like domains-containing protein

Lab Annot. F-box/RNI-like/FBD-like domains-containing protein
Mapman: 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G78840.2 11Arabidopsis thaliana04391001000 (0)_
AT5G22670.1 11Arabidopsis thaliana1E-7344539580 (0)C
AT1G69630.1 11Arabidopsis thaliana1E-6944236560 (0)_
Os10g03870.1 7Oryza sativa4E-1635626430 (0)_
Os02g08160.1 7Oryza sativa3E-1225024440 (0)M
Os04g13040.1 7Oryza sativa6E-1127725440 (0)_
Zm00001eb305010_P002 agpv5Zea mays9E-1222029470 (0)_
GRMZM2G037882_P01 3.21Zea mays2E-1121929470 (0)_
Zm00001eb305010_P001 agpv5Zea mays2E-1121929470 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: F-box(1) FBD(1) LRR_2(4) LRR_4(4)
TargetP: Cytoplasm (Class 2 C0.166; M0.078; S0.059; _0.838)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 439 aa (-cTP 402)
Molecular Weight 50.51 kDA(-cTP )
PI 8.89(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19253305(phosphoproteins (etiolated seedling))

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help