PPDB

PPDB	The Plant Proteome Database

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AT1G78820.1 D-mannose binding lectin protein with Apple-like carbohydrate-binding domain-containing protein

Lab Annot.

curculin-like (mannose-binding) lectin protein / PAN domain-containing protein
Mapman: 26.16 misc.myrosinases-lectin-jacalin

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G78830.1 11 Arabidopsis thaliana 0 455 89 93 226 (96) S
AT1G78860.1 11 Arabidopsis thaliana 2E-109 444 43 58 39 (30) S
AT1G78850.1 11 Arabidopsis thaliana 2E-109 463 41 57 262 (121) S
Os04g23720.1 7 Oryza sativa 3E-33 362 29 44 0 (0) _
Os02g13965.1 7 Oryza sativa 3E-31 377 27 43 0 (0) S
Os01g72810.1 7 Oryza sativa 4E-30 260 33 45 0 (0) M
v1_GRMZM2G383881_P01 4a53 Zea mays 1E-29 370 26 42 0 (0) M
Zm00001eb239040_P001 agpv5 Zea mays 1E-29 370 26 42 0 (0) M
GRMZM2G383881_P01 3.21 Zea mays 1E-29 370 26 42 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	B_lectin(1) PAN_1(1) PAN_2(1) S_locus_glycop(2)
TargetP:	Secreted (Class 3 C0.005; M0.045; S0.887; _0.358)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	455 aa (-cTP 434)
Molecular Weight	50.59 kDA(-cTP )
PI	8.75(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
324	Detail								leaf [A. thaliana]	cell wall enriched	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
451	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
1202	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1207	Detail								leaf [A. thaliana]	total leaf tissue	clpp3 null
1407	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	clpr2-1
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1528	Detail								leaf [A. thaliana]	chloroplast nucleoid	wild-type (rep. 1)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1532	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	clps (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2219	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2223	Detail								Total soluble [A. thaliana]	Total soluble proteins	cGEP strep
2296	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT
2307	Detail								[A. thaliana]		Clp C1 TRAP
2399	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1WTSTREP
2400	Detail								leaf-soluble [A. thaliana]	GFP-nano-trap	wt/DUF760-1GFP/ClpC1TRAPSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

18538804(apoplast)
19200160(flower-stage 12)
18796151(cell wall (hypocotyl))
19525416(leaf (wt and clpr4-1 mutant))
17216043(leaf)
19888209(leaves)
20166762(whole leaf)
WallDB-E.Jamet(cell wall reference proteome)
21109274(cellwall-glycoproteome)

Comparative Proteomics Data